rs30835676 SNP Detail

Summary

• ID
  rs30835676
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135108565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGAGGTGGA GGCGGGGGAT GATAGGGACC TTGGCAGAGA
  GGCAGGAAGG AACTGGGCTG GAAGTGGCAT GGTGTTTTCA GCTATGCCCT GTGCATGCCC
  R
  TGTTTGTATC TGTCTAGAAT CACGATGTGC CACAATGCAA CTCCTTCCAT CTTAGGGTTA
  CAGAGCCCCA CACACGCAGC TGTATACCTT TTTATTTCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	AKR/J	BALB/cByJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49675346	NES12974064	PERLEGEN	MM_PANEL2	f	SNP		A	G	A	G	A	G	G
ss145526780	ENSMUSSNP6878648	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	AKR/J	BALB/cByJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30835676					SNP	G	A	G	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49675346	NES12974064	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135108565 () rs orientation: forward

Symbol	Name	Function Class
Gm70875	predicted gene, 70875	1864 bp downstream
Rr419094	regulatory region 419094	896 bp distal
Rr419095	regulatory region 419095	within coordinates
Tssr13831	transcription start site region 13831	59 bp downstream