rs30835682 SNP Detail

Summary

• ID
  rs30835682
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135106854 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAAGAGCG CTGCTTGAAC
  GCTCTGCACC TCAGTGTTTG TTCCCCCGAT GCCCCTGACA GATAGGAGCC CAGAGAACTC
  TCTGTAGGCT AGGCTAGCAA TGTGACGCTG ACTCAGCTTT TGCTTCAAAG TGGGGGTGCA
  AAGGTCCCTG GCCACACCTT TTTGTGGGAA ACACGGAGGA AATTCCCAGC ATGCAAAAGA
  R
  ACTAAAGTTA GACACAGAGA TCCAACCCCC TAGTTCTGCC CAGTTCTGTC ACACCTTAGA
  ATTGCGGCCC AGCTTCTGTT CCCCAGAATA GGCAGGTCTA GATTGGCAGC CGAAGATCAG
  AGGACAAATG ACCTACAGAT GGACAGAATG ATCTCCAGCC GCAGTCGGAG CTTATTCCAA
  CACCACTGCC TGCTGTCCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss49675352	NES12974097	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs30835682					SNP	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49675352	NES12974097	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135106854 () rs orientation: forward

Symbol	Name	Function Class
Rr419094	regulatory region 419094	within coordinates
Rr419095	regulatory region 419095	1546 bp proximal
Tssr13831	transcription start site region 13831	1770 bp downstream