rs30836302 SNP Detail

Summary

• ID
  rs30836302
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:136979929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTGTCATC CTCTTTAACC
  CACTCAGGCT TCCCAGCACA AGAATCAAGA GAGGAAATGC ACTTCACATA TCTGAAGGTT
  TGGAAGCACA AAGTCAGGAA CCTAGCAGAT GTGATATCTG ACAAGCATGG CTCCCTCATG
  GACTTTCTAT GCATCCTCAC AGGATGGCAA AAGGGCAAAT AGACATGCTC AGATATGCTA
  Y
  GTTTAGTGAC TGTCATTTAT GAGGCTCCAC CTTGACAGTC TATTCACCTC TTTAGTTGCC
  AAGACTAAGC ACTACTGAAC TAAGACTAAT ATTAGTCTAC AAATCAGGAA ATACAAACAC
  TCAGACCAAA GCACCTTTTT CAAATGTGTT AATTGCTTCT TACAGGAATG CCCAACTACC
  TGGCATTGCA ACATGATGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46989787	NES10871325	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30836302					SNP	T	T	T	T	T	T	C	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46989787	NES10871325	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136979929 () rs orientation: forward

Symbol	Name	Function Class
Rr585929	regulatory region 585929	1304 bp proximal