rs30844066 SNP Detail

Summary

• ID
  rs30844066
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127794743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGTATGTA TGTATGTATG
  CATGTATGTG TATATATATG TATGCATGTG TGCATGCATG TATGTGTGTA TGTATGTATG
  TGTATGTATG TGTATATGTA TGTGTATGTA TGTATATATG TTGTGTGTAT ACATGTTGTT
  TATACATTGC TAGTTATGTA GTACTACACA GGCTGAGGAC CCTGACTGGT GCAGTCCTGT
  R
  CAGGTCTTGT GCATGCTGTC TTAGTCTCTG TGAGTTCCTA TGAGCTTTCC TCGTGTTGAT
  TTACAGGGTC TTGTTTGCTT GGTGTCCTCC ATCCCCTCTG GTGCTTACAT TCTTTCTGCT
  TCCTCTTCTG ATGACTCTAG AGGGGGAGAG TTTTGATGGA GATCTCTCGT TTAGGGCTGA
  GTGTTCTGAG ATCTTTCATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45470029	mCV25234250	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss135877544	ENSMUSSNP2909165	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss320959098	CHEV_3_127704012	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30844066					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127794743 () rs orientation: forward

Symbol	Name	Function Class
Rr52	regulatory region 52	within coordinates
Rr584916	regulatory region 584916	880 bp proximal
Rr584917	regulatory region 584917	967 bp proximal