rs30845639 SNP Detail

Summary

• ID
  rs30845639
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:139412547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAACT GTAAGGCATT TTCTCAATTA
  S
  TGATCAAGGA AGGGAGGGCC CCTTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss44969985	mCV23214848	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30845639					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:139412547 () rs orientation: forward

Symbol	Name	Function Class
Aspm	abnormal spindle microtubule assembly	within coordinates
Tssr235	transcription start site region 235	1282 bp downstream