rs30846317 SNP Detail

Summary

• ID
  rs30846317
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:75369548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACGTT TGTCTCAAGT AATGTATATT
  R
  TTCATTATTT TGTAAACAGC AGAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39228444	mCV24265473	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss139749553	ENSMUSSNP6027277	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss324673216	CHEV_14_75531915	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30846317					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:75369548 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6736	CpG island 6736	1316 bp distal
Cpgi6737	CpG island 6737	848 bp distal
Gm62951	predicted gene, 62951	1487 bp upstream
Lcp1	lymphocyte cytosolic protein 1	within coordinates
Lrrc63	leucine rich repeat containing 63	1227 bp upstream
Tssr4477	transcription start site region 4477	1474 bp upstream
Tssr126606	transcription start site region 126606	958 bp downstream
Tssr126607	transcription start site region 126607	867 bp downstream
Tssr126608	transcription start site region 126608	830 bp downstream
Tssr126609	transcription start site region 126609	545 bp downstream
Tssr126610	transcription start site region 126610	501 bp downstream
Tssr126611	transcription start site region 126611	70 bp downstream
Tssr126612	transcription start site region 126612	54 bp downstream
Tssr129761	transcription start site region 129761	1503 bp upstream
Tssr129762	transcription start site region 129762	1486 bp upstream
Tssr129763	transcription start site region 129763	1459 bp upstream
Tssr129764	transcription start site region 129764	1165 bp upstream
Tssr129765	transcription start site region 129765	1062 bp upstream
Tssr129766	transcription start site region 129766	526 bp upstream
Tssr129767	transcription start site region 129767	474 bp upstream