rs30848736 SNP Detail

Summary

• ID
  rs30848736
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137040808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGGGGTGG AGGGTATGGG
  CAACTTTTGG GATAGCATTG GAAATGTAAT TGAGGAAAAT ACCTAATTAA AAAAAAAAAG
  TGAAGTGTGT TCTGACCAGT AAGTGACAAG GCTGAGAGTG TAGAACTTCG TCTAATCTGC
  AAAATCTTTT CACAGAGCAC CAGTCTAAGG TACAGTCCAA GATAAAAACC AAACTAAACT
  R
  TCAGTAGGCA TAGACTAATT TAATAGTCAC AATTGTGAGA AAACAACCCT ACTTTGAATA
  TTTGCTTATC ATTCTGGAAG CAACTCTTCC ATAAGCCACC CATATGGGAT TGAAATGATC
  AGCACAGGAC ACTCTACTTC CAACTCTAAA TTCACATTTC TGTGAATACC AAAGAGCTAG
  CTGTACTTGC AGTTTGCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46990299	NES10869576	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30848736					SNP	A	A	A	A	A	A	G	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46990299	NES10869576	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137040808 () rs orientation: forward

Symbol	Name	Function Class
Tssr35852	transcription start site region 35852	1080 bp downstream