rs30850549 SNP Detail

Summary

• ID
  rs30850549
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94577508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGACA TGCTGTGTGG ACGTGCCTCC
  R
  CCTGGAGCTG GGATGGCTGG CATTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss45970801	mCV22653900	ABI	CRAMUS_MOUSE	f	SNP		G	G				A	G
ss51765757	NES14793402	PERLEGEN	MM_PANEL2	f	SNP	G		G	A	G	G		G	G	G	G	G	G	G
ss133401630	ENSMUSSNP3276447	ENSEMBL	ENSEMBL_Sanger	f	SNP			G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30850549					SNP	G	G	G	A	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51765757	NES14793402	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94577508 () rs orientation: forward

Symbol	Name	Function Class
Rr137705	regulatory region 137705	493 bp proximal
Rr141882	regulatory region 141882	1708 bp distal
Rr145329	regulatory region 145329	1183 bp distal
Rr151089	regulatory region 151089	94 bp proximal
Slc25a26	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	within coordinates