rs30850682 SNP Detail

Summary

• ID
  rs30850682
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5710285 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGTGGTCA GAGTTGAGCC AACAGAGCCC AATTCAGCTC
  CTGCCCCTTT TTTACAGGGA AGGCCAGCCC ATGAGCCTCC CACTGTATAG AATGTAGACC
  R
  CAGGGACCTC CGACCCAGAT CCTCTCCTGG CTCTCCCAGG CTCGCCTGCC CCTTACCTTT
  GCCATAGAAG TACTTGCGGT AGTAGCCTGC ACCCAGATC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44969850	mCV24137881	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30850682					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5710285 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10466	CpG island 10466	478 bp proximal
Sipa1	signal-induced proliferation associated gene 1	within coordinates
Tssr157622	transcription start site region 157622	1368 bp downstream