rs30851498 SNP Detail

Summary

• ID
  rs30851498
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:89508318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGGCTTAGA CCTAAAAGAT TCTCAAACGT TTACTGTCTA
  CTGATTATCA ATAAAGACAA GCAATTAATA AAAGTTTATT ATCATTTTGA ACTAAAATTT
  Y
  CATCTTATCA GGAGGGAGGG TGAGAAGGAG GGAGGAAGGG AAGGGTGGGC AGGCAGGGGA
  GTGGAGGGGC AAATGTGTTC AAACGTTCTA TAAAATTCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46450902	mCV24933512	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss147258137	ENSMUSSNP2782464	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30851498					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:89508318 () rs orientation: forward

Symbol	Name	Function Class
Rr229371	regulatory region 229371	1604 bp distal
Scyl2	SCY1-like 2 (S. cerevisiae)	within coordinates
Tssr98887	transcription start site region 98887	1734 bp downstream