rs30855414 SNP Detail

Summary

• ID
  rs30855414
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71250445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATCT GTATTTTATG TCCTTTCACA
  R
  TTTGGAGAAG TAGCACAGGA GTAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45971640	mCV22369518	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss133274960	ENSMUSSNP7155772	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
ss321817336	CHEV_6_71223455	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs30855414					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71250445 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17522	CpG island 17522	1143 bp distal
Krcc1	lysine-rich coiled-coil 1	within coordinates
Mir8112	microRNA 8112	1660 bp downstream
Rr379580	regulatory region 379580	895 bp downstream
Rr631924	regulatory region 631924	1432 bp distal
Rr631925	regulatory region 631925	441 bp distal
Tssr56989	transcription start site region 56989	1855 bp downstream
Tssr56990	transcription start site region 56990	1718 bp downstream
Tssr61350	transcription start site region 61350	1949 bp upstream