rs30863065 SNP Detail

Summary

• ID
  rs30863065
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5709951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACGG TTACACCTTG TCCCAGGACC
  R
  GGGAACAAAT GTCTAAGTCC TCCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss44972580	mCV24137873	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss146013226	ENSMUSSNP1567582	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G	G
ss325717227	CHEV_19_5659923	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30863065					SNP	A	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5709951 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10466	CpG island 10466	812 bp proximal
Sipa1	signal-induced proliferation associated gene 1	within coordinates
Tssr157621	transcription start site region 157621	1672 bp upstream
Tssr157622	transcription start site region 157622	1702 bp downstream