rs30866899 SNP Detail

Summary

• ID
  rs30866899
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:134432865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGCT TCCTGAGGTT ATGTTTGCGC
  W
  AAATATCAAC CACCAAGGGA GCAGC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	MSM/Ms	NZW/LacJ	PWD/PhJ	SM/J
ss49678216	NES12993722	PERLEGEN	MM_PANEL2	f	SNP			A	T			A		A	A
ss145506847	ENSMUSSNP4375843	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T			T			A
ss319982803	CHEV_1_136401704	CHEVERUD	SCREENING_POP	f	SNP						T					T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	MSM/Ms	NZW/LacJ	PWD/PhJ	SM/J
rs30866899					SNP	T	T	A	T	T	T	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49678216	NES12993722	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134432865 () rs orientation: forward

Symbol	Name	Function Class
Gm25612	predicted gene, 25612	211 bp upstream
Gm70637	predicted gene, 70637	641 bp downstream
Rabif	RAB interacting factor	within coordinates