rs30866942 SNP Detail

Summary

• ID
  rs30866942
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:164036754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAGGTCGTG GGTTTAGTTG TTTCTTGAAA TGGCAATGAA
  GGAAACAGCC CTGAGTAGAT GTAGTTACTG TTCTCAGTGG TTGCTTTCTC ATAATTGACA
  M
  TGAGAGGTAG GTCAAGTAAT TTTCAGTCTA TGAAAGAAAC CCCAGCAACA AAGGTGTCAA
  CTGCTTTCCC AAAGTGCAGC ACAGCTAGTC AGTGTCCAC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss44972728	mCV23038176	ABI	CRAMUS_MOUSE	f	SNP	A		C
ss145974662	ENSMUSSNP4748444	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs30866942					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164036754 () rs orientation: forward

Symbol	Name	Function Class
F5	coagulation factor V	Intron
Rr422161	regulatory region 422161	415 bp distal
Rr422162	regulatory region 422162	1797 bp proximal