rs30867047 SNP Detail

Summary

• ID
  rs30867047
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:134593410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTAGTGTTAG TAGGTGGGAC AGAGTGAGGT CTCTCCTTGT
  CACAATGTCT TGGCTTAAGC AGAAGGTTTG GTTGAGTAGA TGCAGCCTTC CCTGGGAGAA
  R
  AAGCATGGTG GCAGCTTTAG GGTTAGGGCT GTGGGGGTGA GAGTGGGAAA GAAAATCAAA
  TGCTAGCTGC TATTGCGTCC TTGCCGTAGG GCAGTACTGT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	KK/HlJ	NZW/LacJ
ss49677603	NES12989933	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	KK/HlJ	NZW/LacJ
rs30867047					SNP	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49677603	NES12989933	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134593410 () rs orientation: forward

Symbol	Name	Function Class
Rr418971	regulatory region 418971	418 bp distal
Syt2	synaptotagmin II	Intron