rs30867654 SNP Detail

Summary

• ID
  rs30867654
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135934846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTCCACTTC CCCAACCAGC TACCAGTGTC TGTCCAAGCA
  ATAGTTCGGT TTCCTTCTGG TTAATTATAA CCAATTTAAG AACCAAACCA CAATTTCTTA
  R
  GGGGAACATC CAGAGGAGGA TGGGAGACCC TCAGTCCAGA AGAACCCATA ACTTTCTGAA
  GATTCTCTCC TTTAACCCAC AGAATAAGGA CATGCCTAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss44972730	mCV27553516	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145550648	ENSMUSSNP6222920	ENSEMBL	ENSEMBL_Sanger	f	SNP			A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30867654					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135934846 () rs orientation: forward

Symbol	Name	Function Class
Cpgi801	CpG island 801	320 bp proximal
Igfn1	immunoglobulin-like and fibronectin type III domain containing 1	766 bp upstream
Rr28609	regulatory region 28609	154 bp proximal
Rr372097	regulatory region 372097	1389 bp upstream
Tmem9	transmembrane protein 9	1111 bp upstream