rs30868710 SNP Detail

Summary

• ID
  rs30868710
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:105073510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCACTACTC CACAGCCCAA
  GGACTGATAA CCGCACCCTC TGCTTTCCTT TCAGAAGAGA ACTCCAACTC GGACTCAGAC
  TCTGACTAAA GGCCTGTCTG AGCTTAACAA CTAGAGCCAC TCGGCCCTCT CACCCACGCT
  GTCCTGACGG GGCTCCTGGA GCATGGCAGG AATGCCCATG GGAGAACAGA CCGAGGAGCC
  M
  GTCTCTCAAG ATTACACTCC CGAGGCCTCA CATTCAAAAT TGGCTGTGCT GGCTTGGCAC
  TGCTGAGCTA GCGTGGTAGG GCACGTTGAC AAGCCTTCCT TCTCCCCTTT CTGTCCTTGA
  GCCCCTTTAA CCTCACTGCC CCCACCGAAG CACACATCAA ACGGAGCCAA TCACTACAGC
  CAATCATGTG GCAGCATGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47492006	NES11218282	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30868710					SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47492006	NES11218282	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:105073510 () rs orientation: forward

Symbol	Name	Function Class
Cmtm3	CKLF-like MARVEL transmembrane domain containing 3	within coordinates
Cmtm4	CKLF-like MARVEL transmembrane domain containing 4	1313 bp downstream
Tssr79058	transcription start site region 79058	1585 bp downstream
Tssr79059	transcription start site region 79059	75 bp upstream
Tssr79060	transcription start site region 79060	581 bp upstream