rs30871970 SNP Detail

Summary

• ID
  rs30871970
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124153701 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TTTGA AAGACGAGCC AAATATAAAA
  R
  AGAACCCGTC TCACTAACTC TGGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss46454391	mCV22574126	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss145830208	ENSMUSSNP7211714	ENSEMBL	ENSEMBL_Sanger	r	SNP	T	C
ss322855349	CHEV_8_125950862	CHEVERUD	SCREENING_POP	r	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30871970					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124153701 () rs orientation: reverse

Symbol	Name	Function Class
Mela	melanoma antigen	within coordinates
Tssr2728	transcription start site region 2728	511 bp downstream
Tssr79965	transcription start site region 79965	1448 bp upstream
Tssr83353	transcription start site region 83353	223 bp upstream
Tssr83354	transcription start site region 83354	596 bp downstream
Tssr83355	transcription start site region 83355	683 bp downstream
Tssr83356	transcription start site region 83356	760 bp downstream
Tssr83357	transcription start site region 83357	875 bp downstream
Tssr83358	transcription start site region 83358	1140 bp downstream