rs30873391 SNP Detail

Summary

• ID
  rs30873391
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:134337193 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTCACAGA AATATGATAG
  CCTTTGCTAC CCAAGTGCTG GGAATTAAAG GCATGCACCA TTCGGCCTAA TCTATAATGT
  CCTACCTCCA AGGGATCCTC CGAACAAGTG TTTTAGATGA ACTCCTTAGA AGGAATTCTA
  CTCTGGCTTC TAATGTGACT ATTAAGGTTC AGAAAAGCAG GTCCTGGTGA ACGTGCAGGC
  R
  GAGGTCAGAG GATTGGCTAC AGCAGGAGAG CATATGCAGT GTGGTGATAA ACTGAGATGA
  CAGGGTTGCT CAGCGAAGGA GCTAGACAGA GAAGAGAGAG AGAAGAGAGA GTATGCACAT
  CTCATCGTGG GATATCCTCA TTCAGGAATC ACCCCAATGC TGCAGCTGAT CCGGGCCATC
  TTGAAAGTCC CTGAAGATCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss49678549	NES13000724	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs30873391					SNP	A	A	A	A	A	A	G	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49678549	NES13000724	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134337193 () rs orientation: forward

Symbol	Name	Function Class
Cyb5r1	cytochrome b5 reductase 1	within coordinates
Tssr8884	transcription start site region 8884	1326 bp downstream