rs30878102 SNP Detail

Summary

• ID
  rs30878102
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:155607484 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTTTGAG TATAGTGAAG
  CCTCCATCAC TAACCTCAAG AATAAAATTC CTCTCTACAC AGAGGTGTCT GCCACAAACC
  ATATGTTATC AAAAACCCTA TCGGAAACCC ATCATGTTCA TTCAATGTTA CAGAAAACAC
  GTACAGAATA TTACACAGCA CCCTCAAACA GCACAGCAAA GCATAAACAT GACCCATCTC
  W
  GACTGGTATC TTCCATGCAC ACATGAGAGT TTTAAAGTCC CTGTATTTTA TCTGTATCTA
  GCAGTGACCT TAGAAGTGAG TTAGGTGGTG TTTCCCAATG GACAGACTTT TCAGTGGTTT
  CAGCTTAGTT AAAAAGAGGG AGTTGGCATG AGGCAATTAT TGTGTTCTTG AGCAACAGAT
  GGTCAACAGT TTGGCTGAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47494092	NES10324354	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30878102					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47494092	NES10324354	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:155607484 () rs orientation: forward

Symbol	Name	Function Class
Gm37102	predicted gene, 37102	1501 bp upstream