rs30879371 SNP Detail

Summary

• ID
  rs30879371
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:122296231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAT CAAAGTGGTT CACCTTGCAG
  M
  TGCCACCCCT TCCTCTCTAT GCTTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39230890	mCV25174047	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A
ss147010257	ENSMUSSNP6921218	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		A
ss324857819	CHEV_14_122458041	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30879371					SNP	C	C	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:122296231 () rs orientation: forward

Symbol	Name	Function Class
Gm63354	predicted gene, 63354	755 bp upstream
Gm63496	predicted gene, 63496	1542 bp downstream
Rr404309	regulatory region 404309	1895 bp upstream
Rr498317	regulatory region 498317	766 bp distal
Rr498318	regulatory region 498318	445 bp distal
Rr498319	regulatory region 498319	1823 bp proximal
Tssr127312	transcription start site region 127312	453 bp downstream
Tssr130315	transcription start site region 130315	736 bp upstream