rs30884267 SNP Detail

Summary

• ID
  rs30884267
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55166130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCCA AAAAGGCCTT TCCCGTTAGC
  R
  TTGCCTTTCC ACCCTCTCCA GTCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39231119	mCV23146827	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss139573247	ENSMUSSNP6023113	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss324640903	CHEV_14_55547510	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30884267					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55166130 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6479	CpG island 6479	1605 bp distal
Gm62292	predicted gene, 62292	1913 bp upstream
Rr389680	regulatory region 389680	388 bp upstream
Rr492368	regulatory region 492368	1423 bp distal
Rr492369	regulatory region 492369	1847 bp proximal
Tssr128674	transcription start site region 128674	1903 bp upstream
Tssr128675	transcription start site region 128675	1868 bp upstream
Tssr128676	transcription start site region 128676	1645 bp upstream