TTCCT TTATGGCCAA AGGACACAAA M CCAGGCTTTG GTCGCTTTAC CTGGC M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss45974329 | mCV24907966 | ABI | CRAMUS_MOUSE | f | SNP | C | A | C | ||
ss133371764 | ENSMUSSNP4797960 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | ||||
ss321851926 | CHEV_6_89286903 | CHEVERUD | SCREENING_POP | f | SNP | A | C | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
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rs30886705 | SNP | C | A | C | A | C |
Location: Chr6:89313891 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Plxna1 | plexin A1 | within coordinates | ||||||
Rr141614 | regulatory region 141614 | 310 bp proximal | ||||||
Rr150842 | regulatory region 150842 | 692 bp distal | ||||||
Rr150843 | regulatory region 150843 | 1311 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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