rs30886909 SNP Detail

Summary

• ID
  rs30886909
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51490770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGT TAAAGTAATT TTAAGATCTA
  Y
  ACCAGACCTG AAAGTTTCTT GAGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ
ss49181973	NES12486820	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ
rs30886909					SNP	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49181973	NES12486820	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51490770 () rs orientation: forward

Symbol	Name	Function Class
Gm62421	predicted gene, 62421	within coordinates
Rnase2a	ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin)	1949 bp downstream
Tssr125425	transcription start site region 125425	551 bp upstream