rs30886913 SNP Detail

Summary

• ID
  rs30886913
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51490701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTCTCTTCA GGAAGCTTGA CTTCTGAATT TCCTTCTGGT
  TATGTTCTGC TGGTAATTAG ATAATTTAGC ACACATTGAG AGCCCTGTTC CTCCATTGTT
  W
  GGTTTGCTAT GCTTGATGGT AAATCTAACC ATGACCTACC GGGAGAGTTA AAGTAATTTT
  AAGATCTACA CCAGACCTGA AAGTTTCTTG AGCAGACAAA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
ss49181977	NES12486818	PERLEGEN	MM_PANEL2	f	SNP	T	T	A	T	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
rs30886913					SNP	T	T	A	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49181977	NES12486818	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51490701 () rs orientation: forward

Symbol	Name	Function Class
Gm62421	predicted gene, 62421	within coordinates
Tssr125425	transcription start site region 125425	620 bp upstream