rs30891327 SNP Detail

Summary

• ID
  rs30891327
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147978433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAT ATGATGGTTT TGGTAGCCTG
  M
  CATAGTGGAA ACTCAATAGA AGTAG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45476899	mCV22802079	ABI	CRAMUS_MOUSE	f	SNP			C			A		A
ss47037297	NES10847878	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C		C	A	C		C	A	A	C		C
ss136057905	ENSMUSSNP5053569	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C					A
ss321014839	CHEV_3_147935761	CHEVERUD	SCREENING_POP	f	SNP										C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30891327					SNP	C	C	C	C	C	A	C	A	C	C	C	A	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47037297	NES10847878	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147978433 () rs orientation: forward

Symbol	Name	Function Class
Rr375892	regulatory region 375892	1166 bp upstream
Rr587183	regulatory region 587183	331 bp distal
Rr587184	regulatory region 587184	29 bp distal