rs30891560 SNP Detail

Summary

• ID
  rs30891560
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:79202777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTG TTTATTATAT GTAAGTACAC
  W
  GTAGTTATCT TCAGATGCAC CAGAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39231974	mCV24524226	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T
ss139803520	ENSMUSSNP3764590	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss324676648	CHEV_14_79365144	CHEVERUD	SCREENING_POP	f	SNP					T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30891560					SNP	A	A	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79202777 () rs orientation: forward

Symbol	Name	Function Class
Gm6997	predicted gene 6997	612 bp downstream
Tssr126779	transcription start site region 126779	1527 bp upstream
Tssr129883	transcription start site region 129883	1219 bp downstream
Vwa8	von Willebrand factor A domain containing 8	within coordinates