rs30892089 SNP Detail

Summary

• ID
  rs30892089
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51365614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACC CCTTGCCAGC TGTAGCATTT
  R
  GAGAGCACCC TAAACCTTGC CTGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss49182499	NES12491404	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G		G	G		A
ss324621289	CHEV_14_51747832	CHEVERUD	SCREENING_POP	f	SNP											G			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30892089					SNP	G	G	G	G	G	G	G	G	A	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49182499	NES12491404	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51365614 () rs orientation: forward

Symbol	Name	Function Class
Rnase6	ribonuclease, RNase A family, 6	within coordinates
Rr404085	regulatory region 404085	521 bp upstream
Rr491778	regulatory region 491778	within coordinates
Rr491779	regulatory region 491779	616 bp proximal
Tssr125412	transcription start site region 125412	748 bp upstream
Tssr125413	transcription start site region 125413	773 bp upstream
Tssr125414	transcription start site region 125414	823 bp upstream
Tssr125415	transcription start site region 125415	850 bp upstream
Tssr125416	transcription start site region 125416	882 bp upstream
Tssr125417	transcription start site region 125417	898 bp upstream
Tssr125418	transcription start site region 125418	928 bp upstream
Tssr125419	transcription start site region 125419	961 bp upstream