rs30892189 SNP Detail

Summary

• ID
  rs30892189
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143565404 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCATGCTGA CCTTTCTCAC
  AGGTGGGTTA GTCTGCTCCT ACAAAATCTG GCACTGGAAC CATTTATGCA ACCAAATGGC
  ACTTTAGCAG AACAGTGTGT AGTGCATAGG TTGAGACACA GTGGTGAAGA AGGAAATATA
  ACAATCCCCA ATTCTGATAA TTCGCTTACC ATGAGATATA GAACAGAGGA TGTTTTTTGC
  Y
  GTCTCTATAC TTATTTCCTT ATCTTTAAAG TGAGAACAGA GAATTATAGA AAGGTGACTG
  CTGTTTAGTT TGAAGAAAAG AAAGAAAAAA GAATGAGATT CTTATCTTCA CCAGGATTCC
  TCTAGTCAAC TGTGCTATAT CTCATTCTGT CCTTTATTCT TTATTATTAA TATTTAAACT
  TAATTAAATT ACAAGTTTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45476512	mCV23568966	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss136026652	ENSMUSSNP6804715	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30892189					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143565404 () rs orientation: forward

Symbol	Name	Function Class
Gm33925	predicted gene, 33925	within coordinates
Gm40160	predicted gene, 40160	1792 bp downstream