rs30892903 SNP Detail

Summary

• ID
  rs30892903
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21573472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCAGGGCA ACTTTCACTA
  TATACTGAGT CATACAATAA GATGCAACAT GTTTCATTTC ATTTCCATAT ACTGAACTCC
  AAGAAAGAAT AATCCTGTGC TTTTCCAGTG TAATGTGACT AGCCTGGAGT TCACTATGTA
  GACCAGGCTA GCCGCAAACC TGAGATCCGC CTGGCTCTGC CTCCCAAAGA CAACTATTAC
  R
  GCATGTGTCA CTATGCCTGA CTTTAGAAAG AATAATTCTT TTTGTTGTTG TTGTTCTTTT
  TGGTTTTGGT TTTTCGAGAC AAGGTTTGTC TGTGTAGCCC TGGATGCCCT GGAACTCACT
  CTGTAGACCA GGCTGGCCTC GAACTCAGAA ATCCGCCTGC CTCTGCCTCC CGAGTGCTAG
  AATTAAAGGC GTGTGCCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44973972	mCV24451884	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss146182893	ENSMUSSNP4140904	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss325752826	CHEV_19_21670598	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30892903					SNP	G	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21573472 () rs orientation: forward

Symbol	Name	Function Class
1110059E24Rik	RIKEN cDNA 1110059E24 gene	1205 bp downstream
Gm38486	predicted gene, 38486	within coordinates
Gm59243	predicted gene, 59243	within coordinates
Rr364167	regulatory region 364167	1930 bp proximal