rs30893095 SNP Detail

Summary

• ID
  rs30893095
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51364459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTGCCTG CCAGGAAATG
  CACAAGACTG AGTCCATTAA TATTCAGTTG TAGATACAGG AGAGGCTCAT GAGACCTCTC
  CAAGGAGTTA ATTGTAGCTG ATGGCTCCAG GAGAAGTCAT TATCTTCAGT GATGTACCCA
  TGCTCCAGTT GAAAGGTTTA CAGTCATGCC CACAAGACCA GTCCTGTTGA AACCCAGTGG
  S
  ACACAAAGTA CAAACAAAAA CTAAACTAAA CTAAACTAAA CTAAACTAAA CTAAACTAAA
  CTAAACTAAA CTAAACTAAA CTAAACTAAA CAATGCAAAT ATCTGGTGTC AAGGGGAAAG
  AGCTGGAGTG GGAGGAGGAG AAGAGAAAGG GGCCGGTGAG GGGACTCAGC AGATAAAGGA
  GCCTGCCATC AGGCCTGATT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49182507	NES12491693	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30893095					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49182507	NES12491693	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51364459 () rs orientation: forward

Symbol	Name	Function Class
Rnase6	ribonuclease, RNase A family, 6	within coordinates
Rr404085	regulatory region 404085	1676 bp upstream
Rr491778	regulatory region 491778	473 bp proximal
Rr491779	regulatory region 491779	1771 bp proximal
Tssr125412	transcription start site region 125412	1903 bp upstream
Tssr125413	transcription start site region 125413	1928 bp upstream
Tssr125414	transcription start site region 125414	1978 bp upstream