rs30893940 SNP Detail

Summary

• ID
  rs30893940
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101425699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAATACTAAA TATATATGAT TTTAAAAAGA AGTGTTTTAG
  AAGCAGATAA AATGGATTTT TGAATTTGTC CTATCTCCTA GCACAGTGGT TCTCAGCCTT
  Y
  CTTATGCTGT GGCCCTTTAA TACAGTTCCT CATGTTGTGC TGACCCCCAA CCATAAAATT
  ATTCTTGTTG CTACAACATA ACTGTAGTTT TGCTATGGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45475382	mCV23083616	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss135548075	ENSMUSSNP5658839	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30893940					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101425699 () rs orientation: forward

Symbol	Name	Function Class
Gm33162	predicted gene, 33162	within coordinates
Rr582066	regulatory region 582066	1309 bp distal
Rr582067	regulatory region 582067	706 bp distal
Rr582068	regulatory region 582068	185 bp proximal
Rr582069	regulatory region 582069	1834 bp proximal