rs30895130 SNP Detail

Summary

• ID
  rs30895130
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51340799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGC GTGTGTGATC CAGAGCCGCA
  W
  CTTTGAAGGC AAGCACAGTG GATTC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss49182657	NES12492527	PERLEGEN	MM_PANEL2	f	SNP		T	T	T	A	T		A	T
ss139474619	ENSMUSSNP843306	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss324621049	CHEV_14_51723017	CHEVERUD	SCREENING_POP	f	SNP							T			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs30895130					SNP	T	T	T	T	A	T	T	A	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49182657	NES12492527	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51340799 () rs orientation: forward

Symbol	Name	Function Class
Ang	angiogenin, ribonuclease, RNase A family, 5	1337 bp downstream
Rnase4	ribonuclease, RNase A family 4	within coordinates
Rr288976	regulatory region 288976	within coordinates
Rr288977	regulatory region 288977	1602 bp proximal
Rr295427	regulatory region 295427	1700 bp distal
Rr299307	regulatory region 299307	within coordinates
Tssr125402	transcription start site region 125402	1532 bp upstream
Tssr125403	transcription start site region 125403	1608 bp upstream
Tssr125404	transcription start site region 125404	1821 bp upstream
Tssr125405	transcription start site region 125405	1986 bp upstream