rs30895132 SNP Detail

Summary

• ID
  rs30895132
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51340480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTCC ACCAGGGTTG CATAAGGGGT
  Y
  TAGTACACAT CTTTTTGAAA AGAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss49182659	NES12492526	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	T	T	C	C		T	C
ss139474613	ENSMUSSNP6541986	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C					C
ss324621047	CHEV_14_51722698	CHEVERUD	SCREENING_POP	f	SNP										C			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs30895132					SNP	C	C	C	C	C	T	T	C	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49182659	NES12492526	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51340480 () rs orientation: forward

Symbol	Name	Function Class
Ang	angiogenin, ribonuclease, RNase A family, 5	1018 bp downstream
Rnase4	ribonuclease, RNase A family 4	within coordinates
Rr288976	regulatory region 288976	121 bp proximal
Rr288977	regulatory region 288977	1921 bp proximal
Rr295427	regulatory region 295427	1381 bp distal
Rr299307	regulatory region 299307	117 bp proximal
Tssr125402	transcription start site region 125402	1851 bp upstream
Tssr125403	transcription start site region 125403	1927 bp upstream