rs30895656 SNP Detail

Summary

• ID
  rs30895656
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:68924693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCATTTTTGT TTGGTCGGTT GATTGGTTTA GTTTGGGGGT
  TTTGGTGCAC ATGTGTGGAC ATGGACGTGG ACATTCATGT GCATACAAAA GCCAGAGCAA
  R
  ATGTGGCTCT CTTCCTCTTC ACTTCATTCC CTTATATGGT CTTTACCTAA AGCAGAAGTT
  TACTGATCCA GCCAGGCAAG CTAGCCACAA AGCTCTTGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45477346	mCV24616622	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	A
ss135264532	ENSMUSSNP3565785	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
ss320791749	CHEV_3_68821282	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30895656					SNP	G	G	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68924693 () rs orientation: forward

Symbol	Name	Function Class
Rr578111	regulatory region 578111	within coordinates
Smc4	structural maintenance of chromosomes 4	within coordinates
Tssr29518	transcription start site region 29518	1252 bp downstream
Tssr29519	transcription start site region 29519	674 bp downstream
Tssr29520	transcription start site region 29520	653 bp downstream
Tssr29521	transcription start site region 29521	1891 bp upstream