rs30895841 SNP Detail

Summary

• ID
  rs30895841
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79783655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTAGAATACA ATTAAAAATT TAATTACAGC AATGATTATT ATTTTTAATT ACAGAAATGC
  CAAGTAAGCA TGCAGAGAGA AGCAAGGAAA GACCATGTGG TACTGGGCTG GAGAGGTGGC
  TCACTACATG CTATTTGCTC TTGCAGAGGA CCTGAGTTTG TTTCCCAGAA CCCACGTGGT
  TATACCTCAA CCATCCATAA TTACACTTTT AGGGCTCTAG CATCTTTGTC AGGAACAAAG
  CTACACATGC AGAAATATAG CCAAATGGTT CTTACTGATA AAGTAAATAA AACAATTTTT
  W
  AAAAAATATT CACATCAGGT ATCTTCCAAA GTCACATCTC TACCTTTTGA GAGGTGGCCT
  CTCACTGAGC CTGAAATACA CTGACTAGCT ACAAAGACTG GCCAGAGAGT TCCAGGAATC
  CTCCTGTCTC TGACCCTATA GTGGTGGGGT TACATGCATG TGCTGCAGCA CCTGGAGTTT
  TAGGTGGGTA CTGGGAATCT GAACTCAGGT CTTTATGCCT GCCCACGCTG TCTCTCCAGC
  CCCTGTTCTG TATTACCAGA GGCGTGGGAG AGGTGTGTCC TATTTAGCTT AAAAGCAGCA
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45477150	mCV23428684	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T	A
ss135376862	ENSMUSSNP6305835	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30895841					SNP	A	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79783655 () rs orientation: forward

Symbol	Name	Function Class
Gm36569	predicted gene, 36569	within coordinates
Rr578599	regulatory region 578599	1992 bp proximal
Tssr29594	transcription start site region 29594	913 bp upstream
Tssr29595	transcription start site region 29595	936 bp upstream