rs30896247 SNP Detail

Summary

• ID
  rs30896247
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:39629996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGCTCACTTT TTCCTTCTTC TTTCTGAACC ATGGCTGACT GGTTCAACTC AGGTGTTCTG
  CTTCAAAACT CTTCTCCAAG CTGACTGACT GAATCTGGCT TCTCTCGCAG CCTCTCCTGA
  ATTGCTCTGC TTGAACTCAT ACTAACTTTG GCAACATGGT CTAATTTTCT GGCTCTTTCT
  CATTCTCTCA TCACCTGATC AAGTTTGTTC TCTCTCTGTA ACCTAGTAAA ACTACCTCCT
  TCCTTTTTTC TCTCTATGCT GCTCTCTCTC TCCTTTTTTT TTTTTTTTTT TTTTTTTTGG
  K
  TTTTTCGAGA CAGGGTTTCT CTGCGCAGTC CTGGCTGTCC TGGAACTCAC TCTGAAGACC
  AGGCTGGCCT TGAACTCAGA AATCCGCCTG CCTCTGCCTC CCGAGTGCTG GGATTAAAGG
  CGTGCGCCAC CACGCCCGGC CATGCTGCTC TCTTAAGAAG CCTCTTTTTC CTCGTTTTTT
  CTCTTGTAAG TTGGGTATTC TTTTGGGGGT GGGGTGGGGT GGGGTGGGGT GAGGGAGGTA
  TCAAAATTCT TTATTTGAAG AAATGGTACA AATTAAAGAA CTTAAGAGGA TGTTTTGGTG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45974808	mCV27586558	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30896247					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:39629996 () rs orientation: forward

Symbol	Name	Function Class
Braf	Braf transforming gene	within coordinates
Fth-ps2	ferritin heavy chain, pseudogene 2	237 bp downstream
Tssr1816	transcription start site region 1816	737 bp upstream
Tssr60501	transcription start site region 60501	1050 bp downstream