rs30897960 SNP Detail

Summary

• ID
  rs30897960
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:10411048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGA GGGCAGGCAG GTGGGTGGAC
  R
  TGTTATGCCC TGTCTCAGCG CAAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss44974861	mCV22700123	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss325720389	CHEV_19_10508174	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30897960					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:10411048 () rs orientation: forward

Symbol	Name	Function Class
Gm59152	predicted gene, 59152	357 bp upstream
Rr544110	regulatory region 544110	1824 bp distal
Rr544111	regulatory region 544111	109 bp proximal
Syt7	synaptotagmin VII	within coordinates
Tssr155051	transcription start site region 155051	1506 bp upstream