rs30900245 SNP Detail

Summary

• ID
  rs30900245
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75104849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaggaagga aggaaggaag TTAGCTGCAT
  GTGAACCAGC CGGCAAGCAG TGTCCTCCAT GGTTCCTGCT GTACTTCTTT GGCTGTGAAG
  TGAGCTTGTT TGGAGGCCGA GCTGTGtggc ttcgcaagca ggcctgcctt caagattctg
  Y
  cctgagttcc tgtcatggct tgcctcaatg atagaccgtg acctggaatt gttgactgaa
  taaaacattc cctcccctaa aatgctttta atctgagtgt tttaccacag caacagCACc
  agggcatgca cttagcacag tgctcaatgg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44975423	mCV23611679	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss144691851	ENSMUSSNP2455547	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
ss319795818	CHEV_1_75124779	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30900245					SNP	T	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75104849 () rs orientation: forward

Symbol	Name	Function Class
Slc23a3	solute carrier family 23 (nucleobase transporters), member 3	within coordinates
Tssr7483	transcription start site region 7483	345 bp upstream
Tssr12338	transcription start site region 12338	372 bp downstream
Tssr12339	transcription start site region 12339	396 bp downstream
Tssr12340	transcription start site region 12340	438 bp downstream