rs30901231 SNP Detail

Summary

• ID
  rs30901231
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:137879194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAA CAAGGAAGCC TGAAGTCTTC
  R
  TGTCACCGAG GTCCCCTGGT GGCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss46995543	NES10871630	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G		G	G		A
ss135949450	ENSMUSSNP1595447	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss320978677	CHEV_3_137836397	CHEVERUD	SCREENING_POP	f	SNP						G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs30901231					SNP	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46995543	NES10871630	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137879194 () rs orientation: forward

Symbol	Name	Function Class
4930579F01Rik	RIKEN cDNA 4930579F01 gene	Intron
Rr586090	regulatory region 586090	641 bp distal