rs30902094 SNP Detail

Summary

• ID
  rs30902094
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:137879223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAGAACAC AGCCTTTGCC
  AAAATGTTCT AAACAGTGGA ACTGAGAACA ACTTTGTTAC TATGTGTGAA AATGAAGGGA
  AACCATTAAC TATGTGCAGT CACTTCCTAG GTAGAGCTGA GACTTAAAAC CTCGGTGGTT
  GAAAGAGAAA ACAAGGAAGC CTGAAGTCTT CATGTCACCG AGGTCCCCTG GTGGCCTCTC
  R
  ATGTAATCGC CTGGGTGGCC TCTGTGTTAA ATCACCTGGT GGTTTCTGTG TTTAATCACC
  TGTGTAGCTG ACGCTCTCTA GATCCAGTCA GCGCTTTCAG CTTTGCACGT GAGTTTTGCA
  GCAGTTTGGT TGTGGGTGTT CCGGAGGTGT ACGGCTTCCT GGGCTCTGCT GCTGGTTCTG
  TTGGGGTGTT TGCTCTGTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46995547	NES10871637	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30902094					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46995547	NES10871637	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137879223 () rs orientation: forward

Symbol	Name	Function Class
4930579F01Rik	RIKEN cDNA 4930579F01 gene	Intron
Rr586090	regulatory region 586090	670 bp distal