rs30902725 SNP Detail

Summary

• ID
  rs30902725
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:34081171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAATGCAGC CCAGGAGAGC
  AGTCCAGGGG AGCTGGTAGA GAGTGTGTGG GTGTGGAAGG GGATCAAAAT ACCAGCTTAT
  CCTTCCAGAA ACAGTGGCTT AATTCTAAAT CGCCTCTCTC TCCCCTCCTT AGAATTGTGT
  GGGACAACAA AAGAAAGAAA AGAAAGCCGG TATCAAGCCT AATTTCAGAG TTGGTACGGC
  Y
  GCTGTGAAAA GCAGTGTGGT GATTCATTGA AATCCTGAAA CCAGGAAGAT ATAATCCTGG
  TTCCTTCTGC TGCAGACCCA AAGGAAATGG AAAGGCTGTC TCAAAAAATA CCCATACCCC
  TATGTTCTCT GCAGCATTAG CCACAATAGT CAAGATGGAA ACAGCCAGAT GTCCGTCAAG
  GAAGGGTGTC TTAGCTGGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39234341	mCV25203052	ABI	CRAMUS_MOUSE	f	SNP	C		T	T	T
ss139269695	ENSMUSSNP759447	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30902725					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:34081171 () rs orientation: forward

Symbol	Name	Function Class
D14Mit45	DNA segment, Chr 14, Massachusetts Institute of Technology 45	1867 bp distal
Tssr128062	transcription start site region 128062	950 bp upstream
Tssr128063	transcription start site region 128063	146 bp upstream