rs3090349 SNP Detail

Summary

• ID
  rs3090349
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  103
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:180847809 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CACTG ACACAGGCTG GTGCCTACAT
  R
  TGCACACCAG AGAGACTCAT GCAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/Sv	A	AKR	BALB/cBy	C3H/He	C57BL/6	CAST/EiJ	DBA/2
ss4327254	M-04325-2	WIMOUSESNPS	MITROCHE_POP	f	SNP	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/Sv	A	AKR	BALB/cBy	C3H/He	C57BL/6	CAST/EiJ	DBA/2
rs3090349					SNP	A	A	A	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:180847809 () rs orientation: reverse

Symbol	Name	Function Class
Gm40033	predicted gene, 40033	332 bp upstream
Gm74821	predicted gene, 74821	1237 bp downstream
Srms	src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites	within coordinates