rs30903704 SNP Detail

Summary

• ID
  rs30903704
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:32179670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATCATTCT GGCCCCTACC
  TCATCATTTG AAAAAGCAAG TTTAACACTA AATGAAGGAC CAACCTAACT TGAAAACTAT
  TCCCACCAGG CATGTCAAAC GTTGCAGGTG TGCTCTTATG AAAGGGCATT TCCTGGAAAG
  CCCAGGATCC AGTGTTTGGC TTCACACTTG GAAAGACCCA GTGTGTACTT CCTGAGGAGC
  K
  GGAAGCACAA ATTCAGAGCT AAAGAGCTTC CGGAAAAAAA GTCAACAAAG ATCAATGGCC
  CCGAGGCAGC CACGTGTATC AAAATACCCA TCAAGAGTCT CCTGCTTGCT CAGTTAATAT
  TTGAAAACCT CAAGCTTCCT GAGTAAATAT ATTGTTCTGT GAACTTTGAG ACTCAGGCAT
  GGAGGCACCA AGGACCTTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss44976790	mCV23095878	ABI	CRAMUS_MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30903704					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:32179670 () rs orientation: forward

Symbol	Name	Function Class
Gm50210	predicted gene, 50210	1912 bp downstream
Rr546421	regulatory region 546421	1712 bp distal
Rr546422	regulatory region 546422	1911 bp distal
Rr546423	regulatory region 546423	within coordinates
Rr546424	regulatory region 546424	687 bp proximal
Sgms1	sphingomyelin synthase 1	within coordinates