rs30905129 SNP Detail

Summary

• ID
  rs30905129
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:175458653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAA GGAAGGTAGA AAGAAGGGAA
  K
  GGAAGGGATG GAGAAAGGAA GACAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss44975757	mCV22956925	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss146323455	ENSMUSSNP1711633	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		G
ss320151877	CHEV_1_177561218	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30905129					SNP	T	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175458653 () rs orientation: forward

Symbol	Name	Function Class
Kmo	kynurenine 3-monooxygenase	1106 bp upstream
Rr396618	regulatory region 396618	731 bp upstream
Tssr10313	transcription start site region 10313	881 bp upstream
Tssr10314	transcription start site region 10314	909 bp upstream
Tssr10315	transcription start site region 10315	928 bp upstream
Tssr10316	transcription start site region 10316	957 bp upstream
Tssr10317	transcription start site region 10317	977 bp upstream
Tssr10318	transcription start site region 10318	1009 bp upstream
Tssr10319	transcription start site region 10319	1017 bp upstream
Tssr10320	transcription start site region 10320	1033 bp upstream
Tssr10321	transcription start site region 10321	1054 bp upstream
Tssr10322	transcription start site region 10322	1068 bp upstream
Tssr10323	transcription start site region 10323	1082 bp upstream