rs30905522 SNP Detail

Summary

• ID
  rs30905522
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70838949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGG GCTCATGCAT GCTAAGCAAG
  Y
  GCTCTGTGCT GCATTCTAAG CCCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39234082	mCV25205810	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss139686314	ENSMUSSNP5274186	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30905522					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70838949 () rs orientation: forward

Symbol	Name	Function Class
B930095I24Rik	RIKEN cDNA B930095I24Rik gene	1247 bp downstream
Cpgi6702	CpG island 6702	1443 bp distal
Dmtn	dematin actin binding protein	mRNA-UTR
Fhip2b	FHF complex subunit HOOK interacting protein 2B	1674 bp upstream
Rr369865	regulatory region 369865	1954 bp downstream
Rr494968	regulatory region 494968	1685 bp distal
Rr494969	regulatory region 494969	1184 bp distal
Tssr4471	transcription start site region 4471	1940 bp upstream
Tssr129613	transcription start site region 129613	1697 bp upstream
Tssr129614	transcription start site region 129614	1678 bp upstream
Tssr129615	transcription start site region 129615	1622 bp upstream