rs30906793 SNP Detail

Summary

• ID
  rs30906793
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:106048177 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTTCCCC TTCTCCAGTG
  ACACTGAGTC TGGGTGTGCT ACCCACACCT TCCCCTTGAA TGTCTCACAC AGATATTCAA
  CTATCAACTG AATCTCGTCA TCTGGGTATC TCACACTTTA AGTAAGTCCA TGACAGCAGA
  CAGACCATCC AGTGACAGGC TCCACTCACA AATACAAATT TCATGTTACA GAGGAAGTTT
  M
  TGATCCAACA GGGAAGGTAA AATACAAATT ATGTAGGAGC TATTTGAAAA CCAAACAGAT
  CAGCTTCATA CTTTATCATA TAAATTAAAG TTTCATGAAT GAAACCTAAT TCTCACCAAT
  AAAAGTTCAA GCCAATCTGG GCGTGGTGCC TCAAGTCTAT AATCTAAAGT TCCTAGAATG
  CTGCAGCTTG TAGACTGCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47495915	NES11194569	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	C	C	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30906793					SNP	A	A	A	A	A	A	C	A	A	C	C	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47495915	NES11194569	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:106048177 () rs orientation: forward

Symbol	Name	Function Class
Fbxl9	F-box and leucine-rich repeat protein 9	within coordinates
Rr185875	regulatory region 185875	23 bp proximal
Tssr79133	transcription start site region 79133	1894 bp upstream
Tssr82641	transcription start site region 82641	801 bp downstream
Tssr82642	transcription start site region 82642	1775 bp downstream