rs30906845 SNP Detail

Summary

• ID
  rs30906845
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103092168 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTCAAAGCCT CTAATACTTT GTTTTCTTTA TTTTTTAAAA GGTTTATTTA TTTTATGTAT
  GTGAGTACAC TGTAGCTGTC TTCAGATACA CCAGAAGAGG GCACCAGATC CCATTACAGA
  TGATTGAAAG CCACCATGTG GTTGCTGGGG ATTGAACTCA AGACCTCTGG AAGAGCAGTC
  AATGCTCTTA ACCACTGAGT CATCTCTCCA GTCCCTACAT TTTCTATTAA TAACTTATCT
  ATCTCCTCAT GTTCTAAAGC TAATGGTTCT GGCAAACCTG TATTCAATCA AATATGTATA
  T
  GTATGTGTGT GTGTGTGTGT GTTTGTATAG TGATCTTTGT TTTGAATTAA TTATTGCAGT
  TGTATAGATA ACAAAGTTAA TACTGAATTA TCTGGCAGAA GTTCAGCAGT TTCTATATGC
  AAAACAATGC TCTCTGCATA TTGAGAATCC TTAACTAAAT TAAGTATTTC TGAAAACTCC
  AATAGAACTA TGAGTATAAC ATAGAGTTCT GATTTCTGAA GACTTTGTAT TATTTTACTT
  GTACTTTCTA ACATATAATC TGCCATCCCT GATTTATTGG CATTTATTGG CATTGTATGA
                                                                   
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45479910	mCV25364802	ABI	CRAMUS_MOUSE	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30906845					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103092168 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13635	CpG island 13635	1709 bp distal
Rr582331	regulatory region 582331	193 bp distal