rs30906890 SNP Detail

Summary

• ID
  rs30906890
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124018150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCATTGCA AACTGCTTTT
  GGCCAGTGTT TTTTTTTCAC AACAACATAA AGCAAACTAA GACAGTGTAT TTTTTATCCT
  TTTACAAAAT ACTGATAAAA TATCTATAAC CTCTGTAATT CTGTTTCTTC AGTATTTTTA
  TGTCAATTAT GACTTTTTAA AAATGTTCCA AGTTCTAAGA TTTTGTCTCA GAATAACAAA
  M
  AAAAAATAGG TTAAACAAAA ATAGTTAAAA TATGTACAAC AAAATAAATT TATAAGATAA
  AATTTATTTG AAATAAAACA AAAGAAATCC CACAATCTGC AAAGGCTTAG GACCATGTTT
  TGTTTTTAAA AAATCCCAGG TCAATTATTA TAACCACCTA AATGTTTATA AGGGTTGCCC
  TTATTACTGT AAGAAATGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45478830	mCV25183665	ABI	CRAMUS_MOUSE	f	SNP	C	A
ss135782538	ENSMUSSNP430500	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		A
ss320926390	CHEV_3_123927419	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30906890					SNP	C	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124018150 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	1678 bp proximal