rs30910210 SNP Detail

Summary

• ID
  rs30910210
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135871245 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GATGCTCGT GTCAGAGATG GCACAGGACA
  CAGTGTGAGG GGTACCTGAT TGCTCTATAG ATCGGGATCT GCTCTCCAGC AAGAACATGA
  GTTGATTCTC TGTGCTGTAG CACAGCTTGG TGATGGGTCT CCAGACCCTA CTTCGGATCT
  S
  CTCTCCAGCA AGAACATGAG TTGATTCTCT GTGCTGTAGC ACAGCTTGGT GATGGGTCTC
  CAGACCCTAC TTCATGGACC ATGACTGTGC CCATGAGAGC TGAAGACTAG ATGCAGACAG
  ACCCTGGATG TGGACAGGCT CTGGCTGTAT                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss49682756	NES12985403	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	G	G	C	C		C	G		G
ss319994059	CHEV_1_137840084	CHEVERUD	SCREENING_POP	f	SNP										G			C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs30910210					SNP	C	C	C	C	C	G	G	C	C	G	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49682756	NES12985403	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135871245 () rs orientation: forward

Symbol	Name	Function Class
Gm71005	predicted gene, 71005	656 bp downstream
Rr419320	regulatory region 419320	625 bp distal
Rr419321	regulatory region 419321	1152 bp proximal
Rr419322	regulatory region 419322	1464 bp proximal